WABI (REST) EnsEMBLの仕様 (2009)

service_name	Ensembl service_desc_en	Ensembl is a joint project between EMBL - EBI and the Sanger Institute to develop a software system which produces and maintains automatic annotation on selected eukaryotic genomes. service_desc_jp	EnsemblはEBI(European Bioinformatics Institute) とSanger Institute による共同プロジェクトで、真核生物のゲノムアノテーションを自動的に生成し更新するソフトウェアシステムの開発を行っています. link_en	http://www.ensembl.org/index.html link_jp	http://www.ensembl.org/index.html wsdl	http://xml.nig.ac.jp/wsdl/Ensembl.wsdl method_name	getGeneInfo method_desc_en	Get detailed gene information. method_desc_jp	遺伝子 ID から遺伝子情報の詳細を取得します. param_start	0 param_print_name	geneId param_inout_name	文字列型 param_desc_en	gene ID param_desc_jp	遺伝子 ID param_example_start param_example	ENSG00000146556 param_example_end param_end	0 result_format_en	Item name and value are described with tab delimited format. If the gene is observed alternative splicing, Transcript2 and Transcript3 information can be seen in the result. result_format_jp	項目名とその値がタブ区切りフォーマットで返されます. 遺伝子に選択的スプライシングがあるならば、Transcript2やTranscript3の情報も見ることができます. result_inout_name	文字列型 result_example_start result_example	&lt;item name&gt;	&lt;item value&gt; result_example	Gene		ENSG00000146556 result_example	Gene name      Q9NSV7 result_example	Chromosome     1 result_example	Location       4274-19433 result_example	Strand 		 -1 result_example	DBXREF		ddbj:AL137714 result_example	DBXREF		ddbj:BX537637 result_example	DBXREF		ddbj:AK024448 result_example	Transcript1    ENST00000326632 result_example	Protein1       ENSP00000317668 result_example	AASeq1		MGAVCTSGARSERTMTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRWVEQSRSQVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPRHRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTENLGKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYKMGYTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWTLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLIWGGDFCLPVLHGGTAPPSLRHCVLKRLPEKTAHQSIKN result_example	CDS1		complement(join(4277..4391,4871..4901,5659..5764,5767..5810,6470..6608,6611..6628,6721..6918,7096..7227,7441..7444,7469..7605,7778..7924,8131..8229,14597..14754,19397..19433)) result_example	Family1		ENSF00000002659 result_example	Family description1	AMBIGUOUS result_example	DBXREF1		swissprot:Q9NSV7 result_example	DBXREF1		swissprot:Q7Z3N4 result_example	Transcript2	ENST00000356572 result_example	Protein2	ENSP00000348979 result_example	AASeq2		GRAARRHHDSCEDAALPGRSDLCRALHPARPAARGGRPADGGCPAVPAEGLWRHLQQVGAATHPHLMRGPSLSWAIPATHPLGAAPLGNPGPGEPIWLPCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSCGGSALTTHAFPPIGGPIPSRFPAANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSGRRERPK result_example	CDS2		complement(join(14175..14754,19184..19200)) result_example	Family2		ENSF00000015212 result_example	Family description2	UNKNOWN result_example	DBXREF2		swissprot:Q9H7N0 result_example_end method_name	getGeneInfoChromosome method_desc_en	Get gene information by both gene ID and chromosome number. method_desc_jp	遺伝子IDと染色体番号から遺伝子情報を取得します. param_start	0 param_print_name	geneId param_inout_name	文字列型 param_desc_en	gene ID param_desc_jp	遺伝子 ID param_example_start param_example	Y74C9A.3 param_example_end param_end	0 param_start	1 param_print_name	chromosome param_inout_name	文字列型 param_desc_en	chromosome name param_desc_jp	染色体番号 param_example_start param_example	I param_example_end param_end	1 param_start	2 param_print_name	organism param_inout_name	文字列型 param_desc_en	organism name param_desc_jp	生物種名 param_example_start param_example	celegans param_example_end param_end	2 result_format_en	Item name and value are described with tab delimited format. If the gene is observed alternative splicing, Transcript2 and Transcript3 information can be seen in the result. result_format_jp	項目名とその値がタブ区切りフォーマットで返されます. 遺伝子に選択的スプライシングがあるならば、Transcript2やTranscript3の情報も見ることができます. result_inout_name	文字列型 result_example_start result_example	&lt;item name&gt;	&lt;item value&gt; result_example	Gene		ENSG00000146556 result_example	Gene name      Q9NSV7 result_example	Chromosome     1 result_example	Location       4274-19433 result_example	Strand 		 -1 result_example	DBXREF		ddbj:AL137714 result_example	DBXREF		ddbj:BX537637 result_example	DBXREF		ddbj:AK024448 result_example	Transcript1    ENST00000326632 result_example	Protein1       ENSP00000317668 result_example	AASeq1		MGAVCTSGARSERTMTPVRMQHSLAGQTYAVPFIQPDLRREEAVQQMADALQYLQKVSGDIFSRWVEQSRSQVQAIGEKVSLAQAKIEKIKGSKKAIKVFSSAKYPAPGRLQEYGSIFTGAQDPGLQRRPRHRIQSKHRPLDERALQEKLKDFPVCVSTKPEPEDDAEEGLGGLPSNISSVSSLLLFNTTENLGKKYVFLDPLAGAVTKTHVMLGAETEEKLFDAPLSISKREQLEQQVPENYFYVPDLGQVPEIDVPSYLPDLPGIANDLMYIADLGPGIAPSAPGTIPELPTFHTEVAEPLKTYKMGYTPPPPPPPPPPAPEVLASAPPLPPSTAAPVGQGARQDDSSSSASPSVQGAPREVVDPSGGWTLLESIRQAGGIGKAKLRSMKERKLEKQQQKEQEQVRATSQGGHLIWGGDFCLPVLHGGTAPPSLRHCVLKRLPEKTAHQSIKN result_example	CDS1		complement(join(4277..4391,4871..4901,5659..5764,5767..5810,6470..6608,6611..6628,6721..6918,7096..7227,7441..7444,7469..7605,7778..7924,8131..8229,14597..14754,19397..19433)) result_example	Family1		ENSF00000002659 result_example	Family description1	AMBIGUOUS result_example	DBXREF1		swissprot:Q9NSV7 result_example	DBXREF1		swissprot:Q7Z3N4 result_example	Transcript2	ENST00000356572 result_example	Protein2	ENSP00000348979 result_example	AASeq2		GRAARRHHDSCEDAALPGRSDLCRALHPARPAARGGRPADGGCPAVPAEGLWRHLQQVGAATHPHLMRGPSLSWAIPATHPLGAAPLGNPGPGEPIWLPCVGGAEVRAQLGSFYSWESESSLPSTPLSLLVSCGGSALTTHAFPPIGGPIPSRFPAANKYLPSSARVQGSVGISIYPATDKATYLSTWSAHSGRRERPK result_example	CDS2		complement(join(14175..14754,19184..19200)) result_example	Family2		ENSF00000015212 result_example	Family description2	UNKNOWN result_example	DBXREF2		swissprot:Q9H7N0 result_example_end method_name	getGeneList method_desc_en	Get a list of all genes on a genome of organism. method_desc_jp	生物種のゲノムにある全ての遺伝子一覧を返します. param_start	0 param_print_name	organism param_inout_name	文字列型 param_desc_en	organism name param_desc_jp	生物種名 param_example_start param_example	human param_example_end param_detail_start param_detail	The following organisms can be specified in this parameter. param_detail	human param_detail	mouse param_detail	chimp param_detail	rat param_detail	zebrafish param_detail	chicken param_detail	mosquito param_detail	fly param_detail	tetraodon param_detail	dog param_detail	celegans param_detail	yeast param_detail_end param_end	0 result_format_en	Gene list of a organism name which exists in Ensembl genome annotation. Gene ID, gene symbol, chromosome number, start position on chromosome, end position on chromosome and strand of annotation are described with tab delimited format. result_format_jp	Ensembl ゲノムアノテーションに存在するその生物種の遺伝子一覧. 遺伝子ID、遺伝子シンボル名、染色体番号、染色体上の開始位置、染色体上の終了位置、アノテーションの方向がタブ区切りフォーマットで記載されます. result_inout_name	文字列型 result_example_start result_example	&lt;gene_id&gt; &lt;symbol&gt; &lt;chromosome&gt; &lt;start&gt; &lt;end&gt; &lt;strand&gt; result_example	ENSG00000146556	Q9H7N0_HUMAN	1	4274	19669	-1 result_example	ENSG00000197194	Q6VEP3_HUMAN	1	24417	25944	-1 result_example	ENSG00000197490	-	1	42912	44799	1 result_example	ENSG00000205292	OR4G11P	1	52878	53750	1 result_example	ENSG00000177693	OR4F5	1	58954	59871	1 result_example	ENSG00000209338	-	1	147647	147749	-1 result_example	ENSG00000196573	-	1	218155	218517	-1 result_example	ENSG00000177799	OR4F29	1	357522	358460	1 result_example	ENSG00000209341	-	1	554742	554813	-1 result_example	ENSG00000209342	-	1	554815	554882	1 result_example	ENSG00000209343	-	1	555925	555992	1 result_example	ENSG00000209344	-	1	556000	556068	-1 result_example	ENSG00000209346	-	1	556070	556142	-1 result_example	ENSG00000209349	-	1	556239	556304	-1 result_example	ENSG00000209350	-	1	557859	557930	-1 result_example_end method_name	getVersion method_desc_en	Get version information. method_desc_jp	Ensembl データベースのバージョン情報を返します. result_format_en	Database version of current Ensembl Database result_format_jp	現在の Ensembl のデータベースバージョンを返します. result_inout_name	文字列型 result_example_start result_example	release-49 result_example_end