How to make releases

How to make releases | DDBJの登録以外のサービス 　| DDBJの新型配列事業 | DDBJ daily update & release 作成 =How to make Daily update of W-DDBJ= 2011 Memo by Okubo, not true any more after replacement of supercomp.

How to decide which Entry should be released on that day

 * Scheduled release:
 * 1) On submission, default release dates are determined by the submitters.
 * 2) Ask the RDB on release date (-10) (automatically done by TSUNAMI)
 * 3) automatically Notify the authors about this by mail (TSUNAMI 10 mails every day)
 * 4) Delay as they wish (manually)


 * Forced release:
 * 1) NCBI kindly mail to "update@" about new journal articles with DDBJ ACC# (one mail per one paper)
 * 2) Annotators check the paper
 * 3) Add the REFERENCE to each record (via TSUNAMI to RDB) and put release flag.

FF maker

 * ask RDB to make FF(flat file) out of entries with release flag.
 * QUESTION: taxonomy 等　外部ＤＢ参照はどの時点でフリーズコピーをするのか？少なくともタイムスタンプが必要

For detailed process DDBJ daily update & release 作成

=How to make release of W-DDBJ=
 * Note: Every bank may introduce alteration upon making release rather than daily update. Thus release is not the sum up of daily updates.
 * 1) start from latest release of GenBank and EMBL.
 * 2) filter originals.
 * 3) add the sum of DDBJ.


 * QUESTION: taxonomy 等　外部ＤＢ参照はどの時点でフリーズコピーをするのか？少なくともタイムスタンプが必要

=How to make non release DNA files=

WGS

 * J-WGSはRDB-DDBJに入っているのでFFとして書き出し　公開日にDDBJのWGSの置き場所におく　置いたらColabにメイルで知らせる

TPA

 * 月一くらい. 　PostGresDDBJで管理　daily やリリースには入れない　別にFTP 検索系にはのせる

MGA

 * only for CAGE project, not any more

=How to make errata lists=
 * suppress list, kill list, and live list