WABI (REST) TxSearchの仕様 (2009)

service_name	TxSearch service_desc_en	TXSearch is a retrieval system for a Taxonomy Database which was unified by DDBJ, GenBank and EMBL, which is developed by DDBJ. This should be helpful as a reference of taxonomic names when you submit nucleotide sequences to DDBJ. service_desc_jp	TXSearchは、DDBJのスタッフにより開発された、DDBJ、GenBankおよびEMBLにより統合化された生物分類データベース（Taxonomy Database）を検索するシステムです. DDBJに塩基配列を登録する際に、生物分類名を確認するために利用できます. link_en	http://txsearch.ddbj.nig.ac.jp/top-e.html link_jp	http://txsearch.ddbj.nig.ac.jp/top-j.html wsdl	http://xml.nig.ac.jp/wsdl/TxSearch.wsdl method_name	getTxId method_desc_en	Get taxonomy ID of a taxonomic name. method_desc_jp	分類名から taxonomy ID を取得します. param_start	0 param_print_name	tx_Name param_inout_name	文字列型 param_desc_en	Taxonomic name param_desc_jp	分類名 param_example_start param_example	Pomphorhynchus bulbocoli param_example_end param_end	0 result_format_en	Taxonomy ID of a taxonomic name result_format_jp	分類名に割り当てられた taxonomy ID result_inout_name	文字列型 result_example_start result_example	60543 result_example_end method_name	getTxName method_desc_en	Get scientific name by taxonomy ID. method_desc_jp	Taxonomy ID から学名を取得します. param_start	0 param_print_name	tx_Id param_inout_name	文字列型 param_desc_en	taxonomy ID param_desc_jp	taxonomy ID param_example_start param_example	60543 param_example_end param_end	0 result_format_en	Taxonomic name of a taxonomy ID result_format_jp	Taxonomy ID に対応する分類学名 result_inout_name	文字列型 result_example_start result_example	Pomphorhynchus bulbocoli result_example_end method_name	searchLineage method_desc_en	Search lineages from multiple genera and species against taxonomy database which is maintained by the International Nucleotide Sequence Database (INSD). method_desc_jp	複数の属と種から分類情報を検索します. 国際塩基配列データベース INSD によって構築されている分類データベースが検索されます. param_start	0 param_print_name	query param_inout_name	文字列型 param_desc_en	The names of genera and species. You can also plural organism names which are specified one name per a line. param_desc_jp	属と種の名前. 1件1行で指定し複数の生物種名を指定することも可能である. param_example_start param_example	Campylobacter coli param_example	Escherichia coli param_example_end param_end	0 param_start	1 param_print_name	ranks param_inout_name	文字列型 param_desc_en	Higher taxonomic ranks which you want to include the result param_desc_jp	検索結果の一覧に加えたい上位の分類情報 param_example_start param_example	family param_example	genus param_example_end param_detail_start param_detail	all - All lineages including the following lineages param_detail param_detail	superkingdom param_detail	kingdom param_detail	subkingdom param_detail	superphylum param_detail	phylum param_detail	subphylum param_detail	superclass param_detail	class param_detail	subclass param_detail	infraclass param_detail	superorder param_detail	order, param_detail	suborder param_detail	infraorder param_detail	parvorder param_detail	superfamily param_detail	family param_detail	subfamily param_detail	tribe param_detail	subtribe param_detail	genus param_detail	species param_detail param_detail	The parameter ranks can be specified such as superkingdom or kingdom in the above besides all. param_detail_end

param_end	1 param_start	2 param_print_name	superkingdom param_inout_name	文字列型 param_desc_en	Result is limited by the specified superkingdom. This parameter is optional. param_desc_jp	検索結果を指定された superkingdom に絞込みを行います. このパラメータは必須ではありません. param_example_start param_example	Bacteria param_example_end param_end	2 result_format_en	Taxonomy and ranks information with tab delimited format. First line is header information and there are query and taxonomic names which are specified in the ranks parameter from left position. The second line and the under part is the search result. The first column is genus or species name which is specified in the query parameter. The second and the following columns are the taxonomic name which is specified in the ranks parameter. The name is described in the result if there is taxonomy in the rank, otherwise - is written. result_format_jp	分類および階層情報がタブ区切りフォーマットで表示されます. 1行目はヘッダ行で左からquery、ranksパラメータで指定された階層の名前が表示されます. 2行目以降は検索結果で、1番左にqueryパラメータで指定された属または種名が表示され、2番目以降はranksで指定された分類の階層に情報があればその分類名が記載され、なければ - が記載されます. result_inout_name	文字列型 result_example_start result_example	query	family	genus result_example	Campylobacter coli	Campylobacteraceae	Campylobacter result_example	Escherichia coli	Enterobacteriaceae	Escherichia result_example_end method_name	searchParam method_desc_en	Execute Taxonomy Database search with taxonomic name, class, rank and so on. method_desc_jp	分類名や分類の階層情報などを指定して、分類データベースを検索します. param_start	0 param_print_name	tx_Name param_inout_name	organism param_desc_en	Taxonomic name param_desc_jp	分類名 param_example_start param_example	Homo sapiens param_example_end param_end	0 param_start	1 param_print_name	tx_Clas param_inout_name	文字列型 param_desc_en	Class of Taxonomic name param_desc_jp	分類名におけるクラス param_example_start param_example	scientific name param_example_end param_detail_start param_detail	All scientific name preferred common name common name synonym param_detail_end param_end	1 param_start	2 param_print_name	tx_Rank param_inout_name	文字列型 param_desc_en	Taxonomic rank param_desc_jp	分類の階層情報 param_example_start param_example	species param_example_end param_detail_start param_detail	All param_detail	no rank param_detail	superkingdom param_detail	kingdom param_detail	subkingdom param_detail	superphylum param_detail	phylum param_detail	subphylum param_detail	superclass param_detail	class param_detail	subclass param_detail	infraclass param_detail	superorder param_detail	order param_detail	suborder param_detail	infraorder param_detail	parvorder param_detail	superfamily param_detail	family param_detail	subfamily param_detail	tribe param_detail	subtribe param_detail	genus param_detail	subgenus param_detail	species group param_detail	species subgroup param_detail	species param_detail	subspecies param_detail	varietas param_detail	forma param_detail_end param_end	2 param_start	3 param_print_name	tx_Rmax param_inout_name	文字列型 param_desc_en	Max number of result param_desc_jp	取得する最大件数 param_example_start param_example	10 param_example_end param_end	3 param_start	4 param_print_name	tx_Dcls param_inout_name	文字列型 param_desc_en	see as scientific name param_desc_jp	検索結果において表示される名前を学名に変換するか param_example_start param_example	yes param_example_end param_detail_start param_detail	yes param_detail	no param_detail_end param_end	4 result_format_en	Detailed taxonomy information if the result has only one hit. Otherwise taxonomy list of the search. result_format_jp	もし、検索結果が1件であれば、その分類情報の詳細が表示されます. 検索結果が複数ある場合は、該当する学名などの生物種名の一覧が返されます. result_inout_name	文字列型 method_name	searchSimple method_desc_en	Execute Taxonomy Database search with taxonomy name. method_desc_jp	分類名で 分類データベースを検索します. param_start	0 param_print_name	tx_Name param_inout_name	文字列型 param_desc_en	Taxonomic name param_desc_jp	分類学名 param_example_start param_example	Homo sapiens param_example_end param_end	0 result_format_en	Detailed taxonomy information if the result has only one hit. Otherwise taxonomy list of the search. result_format_jp	もし、検索結果が1件であれば、その分類情報の詳細が表示されます. 検索結果が複数ある場合は、該当する学名の一覧が返されます. result_inout_name	文字列型